BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H06LP1|AL427682
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1693 0.0
>3x_Contig1604
Length = 15703
Score = 1693 bits (849), Expect = 0.0
Identities = 868/877 (98%), Gaps = 1/877 (0%)
Strand = Plus / Plus
Query: 1 tcagatgaaagcatttcactcgatttgaagcagccgaaattgaaggagcctgtmacccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5333 tcagatgaaagcatttcactcgatttgaagcagccgaaattgaaggagcctgtaacccaa 5392
Query: 61 cctcgtcaaacaacatctccagggtctgagagtaaagaatttctgaaacccgccaaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5393 cctcgtcaaacaacatctccagggtctgagagtaaagaatttctgaaacccgccaaagtt 5452
Query: 121 cctaagcgtcggtcattagacctaaaawatcaagaaatcaatctttcgaatgatgatcaa 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5453 cctaagcgtcggtcattagacctaaaatatcaagaaatcaatctttcgaatgatgatcaa 5512
Query: 181 cgtaagcatcgaaaaaataagacatcattttcccgcaccagtgtcagaagatctgtagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5513 cgtaagcatcgaaaaaataagacatcattttcccgcaccagtgtcagaagatctgtagaa 5572
Query: 241 atggaacgcatgaaacatgactccaactctacatctaattctaatgcaagasacgaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5573 atggaacgcatgaaacatgactccaactctacatctaattctaatgcaagagacgaaacc 5632
Query: 301 aaggagacgaaaagaagatcgttctttggtgtattcaaatgataggtaaccaagggtaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5633 aaggagacgaaaagaagatcgttctttggtgtattcaaatgataggtaaccaagggtaaa 5692
Query: 361 amaaattagttcatccgatagcataccaaaaaaaacaacctgaactgattgaagcaccga 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5693 agaaattagttcatccgatagcataccaaaaaaaacaacctgaactgattgaagcaccga 5752
Query: 421 tgtccttattcttttaattcaagtcaattattgtataaacsgtatgtacacactttgatt 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5753 tgtccttattcttttaattcaagtcaattattgtataaacggtatgtacacactttgatt 5812
Query: 481 cttattgtcattcggcacgtctctcgaccttttttaaactttacatttcttaaggttgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5813 cttattgtcattcggcacgtctctcgaccttttttaaactttacatttcttaaggttgat 5872
Query: 541 gaaaaaccaatatttacattgaagaatataacaacagaagcaatacaggtaaattttggt 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5873 gaaaaaccaatatttacattgaagaatataagaacagaagcaatacaggtaaattttggt 5932
Query: 601 tgatcagtaaacgatatcctgtaagaaggcgattgtracattgaactaaactacactgga 660
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5933 tgatcagtaaacgatatcctgtaagaaggcgattgtaacattgaactaaactacactgga 5992
Query: 661 gtsaattttgacttatagaagggaatacgctgaagataagaaaaaggtagacaatggctg 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5993 gtcaattttgacttatagaagggaatacgctgaagataagaaaaaggtagacaatggctg 6052
Query: 721 cagaaaagatttatgaaccatacaagaagtctcgagggactatgatttacacaccgacta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6053 cagaaaagatttatgaaccatacaagaagtctcgagggactatgatttacacaccgacta 6112
Query: 781 atcagcagatgtcgcgtggtggcataggagaaaagttggctgatttcgtgaagaatctat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6113 atcagcagatgtcgcgtggtggcataggagaaaagttggctgatttcgtgaagaatctat 6172
Query: 841 actkgggtttattatatccatcttcccttttatttaa 877
||| |||||||||||||||||||||||||||||||||
Sbjct: 6173 act-gggtttattatatccatcttcccttttatttaa 6208
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6565
Number of Sequences: 1807
Number of extensions: 6565
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)